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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 6
Map Start: 0 bp
Map Stop: 31,246,789 bp
Features by Type:
286 Marker Oryza
157 QTL
443 Total

Map Features

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Items 1 to 25 of 443.       of 18 | Next
Rice - Synthetic_map1 - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM589 Marker Oryza 1,380,876 - 1,381,023 No other positions
R1985B Marker Oryza 10,689,712 - 10,693,168 No other positions
C607 Marker Oryza 30,993,096 - 30,994,123 No other positions
S12672 Marker Oryza 13,948,634 - 13,950,279 No other positions
RG138 Marker Oryza 6,023,472 - 6,023,977 No other positions
E567S Marker Oryza 1,291,208 - 1,291,578 No other positions
RM253 Marker Oryza 5,425,408 - 5,425,602 No other positions
L124 Marker Oryza 28,679,418 - 28,679,618 No other positions
A123618 Marker Oryza 6,998,987 - 6,999,331 No other positions
RZ612 Marker Oryza 11,695,902 - 11,696,132 No other positions
R2869 Marker Oryza 645,399 - 645,706 No other positions
E10139S Marker Oryza 30,902,087 - 30,904,713 No other positions
S2107 Marker Oryza 1,210,920 - 1,211,314 No other positions
RM115 Marker Oryza 4,182,749 - 4,182,938 No other positions
G294 Marker Oryza 17,054,927 - 17,055,184 No other positions
RM494 Marker Oryza 31,088,151 - 31,088,537 No other positions
PC48M13 Marker Oryza 700,511 - 701,213 No other positions
C1424 Marker Oryza 28,704,960 - 28,705,371 No other positions
RM7269 Marker Oryza 23,678,052 - 23,678,193 No other positions
R2123 Marker Oryza 11,680,399 - 11,681,093 No other positions
C62780S Marker Oryza 2,168,390 - 2,168,677 No other positions
S12926 Marker Oryza 17,158,309 - 17,158,671 No other positions
RG172 Marker Oryza 24,454,713 - 24,455,212 No other positions
E693S Marker Oryza 12,707,760 - 12,709,088 No other positions
RM276 Marker Oryza 6,230,045 - 6,230,185 No other positions